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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs9348726 chr6:26605206 G/A ZFP57 chr6:29640169-29648887:- 0.55 6.1 2.24E-9 Box Plot
THCA rs9348760 chr6:27302720 C/G ZNF322B chr9:99957633-99961910:- -0.41 -6.02 3.46E-9 Box Plot
THCA rs9348761 chr6:27302825 G/A ZNF322B chr9:99957633-99961910:- -0.4 -5.95 5.13E-9 Box Plot
THCA rs9348762 chr6:27302848 G/A ZNF322B chr9:99957633-99961910:- -0.4 -5.99 4.14E-9 Box Plot
THCA rs9348774 chr6:27688930 C/T BTN3A2 chr6:26365387-26378548:+ -0.29 -6.09 2.32E-9 Box Plot
THCA rs9348793 chr6:28084189 G/A BTN3A2 chr6:26365387-26378548:+ -0.29 -6.1 2.25E-9 Box Plot
THCA rs9348794 chr6:28117757 T/A BTN3A2 chr6:26365387-26378548:+ -0.3 -6.25 9.18E-10 Box Plot
THCA rs9348796 chr6:28126202 A/G BTN3A2 chr6:26365387-26378548:+ -0.3 -6.31 6.3E-10 Box Plot
THCA rs9348797 chr6:28137533 G/C BTN3A2 chr6:26365387-26378548:+ -0.3 -6.31 6.3E-10 Box Plot
THCA rs9348798 chr6:28143011 G/A BTN3A2 chr6:26365387-26378548:+ -0.3 -6.39 3.88E-10 Box Plot
THCA rs9355933 chr6:162190430 A/T PKIG chr20:43160426-43252888:+ 0.41 6.36 4.84E-10 Box Plot
THCA rs9357006 chr6:26364628 A/C RNF5P1 chr8:38458179-38458718:- 0.58 6.29 7.27E-10 Box Plot
THCA rs9357008 chr6:26479891 A/C ZNF322B chr9:99957633-99961910:- -0.52 -7.31 1.1E-12 Box Plot
THCA rs9357010 chr6:26527945 C/G ZNF322B chr9:99957633-99961910:- 0.55 10.43 4.54E-23 Box Plot
THCA rs9357045 chr6:27688927 G/A BTN3A2 chr6:26365387-26378548:+ -0.3 -6.21 1.13E-9 Box Plot